# store all paths to plots
paths <- array(data="", dim=c(8,20))
rownames(paths) <- c("B61nsd", "B62nsd", "DB1nsd", "DB2nsd", "LB61nsd", "LB62nsd", "LDB1nsd", "LDB2nsd")
colnames(paths) <- c(1:19,"X")
##paths
for(chr in colnames(paths)){
for(s in rownames(paths)){
paths[s, chr] <- paste("plots_logE_shiftEnd/", s, "_", chr, ".png", sep="")
}
}The order of samples is B61nsd, B62nsd, DB1nsd, DB2nsd, LB61nsd, LB62nsd, LDB1nsd, LDB2nsd. Biological replicates are on the sample row.
This document is built with R version 3.5.1. More info:
## R version 3.5.1 (2018-07-02)
## Platform: x86_64-w64-mingw32/x64 (64-bit)
## Running under: Windows 10 x64 (build 18362)
##
## Matrix products: default
##
## locale:
## [1] LC_COLLATE=French_Switzerland.1252 LC_CTYPE=French_Switzerland.1252
## [3] LC_MONETARY=French_Switzerland.1252 LC_NUMERIC=C
## [5] LC_TIME=French_Switzerland.1252
##
## attached base packages:
## [1] stats graphics grDevices utils datasets methods base
##
## other attached packages:
## [1] knitr_1.24
##
## loaded via a namespace (and not attached):
## [1] compiler_3.5.1 magrittr_1.5 tools_3.5.1 htmltools_0.3.6
## [5] yaml_2.2.0 Rcpp_1.0.2 stringi_1.4.3 rmarkdown_1.15
## [9] stringr_1.4.0 xfun_0.9 digest_0.6.20 evaluate_0.14